In preparation:

Unifying concepts in the Molecular Life Sciences:Volume 11: Evolution, Klymkowsky, M.W.,subsection editor. Encyclopedia of the Molecular Life Sciences, Elsevier. in preparation. 

Shi, J., T. Vonderfecht, M. Winey &, M.W. Klymkowsky. An unxpected function for centrins in inductive signaling during early embryonic development - in progress. 

Published or Submitted:

110. Melanie M. Cooper, M.M, S.M. Underwood, C. Hilley, & M.W Klymkowsky. Intelligent design of a chemistry curriculum leads to dramatic improvements in students understanding of molecular structure and properties. submitted.

109. Henson, K., M.M. Cooper, & M.W. Klymkowsky.2012. Turning randomness into meaning at the molecular level using Muller’s morphs. Biology Open, in press.

108. Cattell, M., A. Garnett, M.W. Klymkowsky, D.M.Medioros. 2012. A maternally established soxB1/soxF axis is a conserved feature of chordate germ layer. Evo. & Devo., in press.

107. Trujillo, C*. M.M. Cooper & M.W. Klymkowsky. 2012. Using graph-based assessments within Socratic tutorials to reveal and refine students’ analytical thinking about molecular networks. BAMBED, in press.

106. Shi, J., H. Zheng, R.D. Dowell, & M.W. Klymkowsky. 2012. sizzled function and secreted network interactions in the dorsolateral mesoderm. Biol. Open., in press

105. Klymkowsky, M.W. 2011. Mitochondrial activity, embryogenesis, and the dialogue between the big and little brains of the cell. Mitochondrion, 11:814-819.

104. Shi, J., C. Severson, J. Yang, D. Wedlich & M.W. Klymkowsky.  2011. Snail2 (Slug)-specific, BMP- and Wnt- dependent mesodermal induction of neural crest inducation.Development,epub.

Klymkowsky, M.W. 2011. Teaching disconcerting scientific ideas.. ASBMB Today ,June

Klymkowsky, M.W. 2011. Why is understanding evolution hard? ASBMB Today, March.

Klymkowsky, M.W. 2011. Getting serious about science education. ASBMB Today, February.

103. Shi, J., J. Power & M.W. Klymkowsky. 2011. Revealing student thinking about experimental design and control experiments. Int. J. Sci. Ed. 5:in press.

Klymkowsky. M.W. 2011. Review of "Why evolution works (and creationism fails). by M. Young & P.K. Strode.  Reports of the National Center for Science Education, in press. 

Klymkowsky, M.W., S. Underwood, & R.K. Garvin-Doxas. 2010. The Biological Concepts Instrument (BCI), a diagnostic tool to reveal student thinking. arXiv:1012.4501v1.

102. Klymkowsky, M.W., C. Cortez-Rossi, & K.B. Artinger. 2010 Mechanisms driving neural crest induction and migration in the zebrafish and Xenopus laevis. Cell Adhesion & Migration, 4:in press.

101. Hikasa, H.. J. Ezan, X. Li, M.W. Klymkowsky & S. Sokol. 2010. Wnt-dependent phosphorylation of TCF3 leads to transcriptional derepression during vertebrate anteroposterior axis specification. Dev. Cell, 9:521-32.

100. Klymkowsky, M.W. 2010. Thinking about the conceptual foundations of the biological sciencesl CBE Life Science Educ, LSE- Cell Bio. Edu. in press.

99. Cooper, M.M., N. Grove, S. Underwood & M.W. Klymkowsky. 2010 Lost in Lewis Structures: an investigation of student difficulties in developing representational competence. J. Chem Ed.,DOI: 10.1021/ed900004y.

Klymkowsky, M.W. 2010. Beyond lecturing and toward learning: personal reflections on improving science learning and cultivating an appreciation of science as a rewarding way of thinking. book chapter, in press, I believe.

Klymkowsky M.W. 2009. Make room for computing. Science. 2009 Oct 9;326(5950):227. (letter)

98. Klymkowsky, M.W. 2009. A guide to the productive poking, prodding and injection of cells, a review of 'Microinjection: Methods and Applications'"Microinjection: Methods and Applications" by David Carroll, ed. Development 136:4070-4072.

97. Zhang, C. & M.W. Klymkowsky. 2009. Unexpected functional redundancy between Twist and Slug (Snail2) and their feedback regulation of NF-kB via Nodal and Cerberus. Developmental Biology, 331:340-9.

96. Klymkowsky, M.W. & P. Savagner.  2009. Epithelial-mesenchymal transition (EMT): a cancer researcher's conceptual friend and foe. American Journal of Pathology. 174:1588-93.

95. Klymkowsky, M.K. & E.M. Furtak. 2009. How the incoherent state of science and mathematics education undermines biological (and scientific) literacy.   Colorado Higher Education News. 

94. Schlosser,G., T. Awtry, S.A. Brugmann, E.D. Jensen, K. Neilson, G. Ruan, A. Stammler, D. Völker, B. Yan, C. Zhang, M.W. Klymkowsky, & Sally A. Moody. 2008. Eya1 and Six1 promote neurogenesis in the cranial placodes in a SoxB1-dependent fashion. Devel. Biol. 320:199-214.

93. Garvin-Doxas, K. & M.W. Klymkowsky. 2008. Understanding Randomness and its impact on Student Learning: Lessons from the Biology Concept Inventory (BCI). CBE Life Sci Educ 7: 227-233.

92. Cortez-Rossi, C., L. Hernandez-Lagunas, C. Zhang, I.F. Choi, L. Kwok, M.W. Klymkowsky & K.B. Artinger. 2008. Rohon-Beard sensory neurons are induced by BMP4 expressing non-neuronal ectoderm in Xenopus laevis, Devel. Biol., 314:351-61.

91. Klymkowsky, M.W. & K. Garvin-Doxas. 2008. Recognizing Student Misconceptions through Ed's Tool and the Biology Concept Inventory.  PLoS Biology, 6: e3.

90. Garvin-Doxas, K., I. Doxas & M.W. Klymkowsky. 2007. Ed's Tools: A web-based software tooset for accelerated concept inventory construction. Proceedings of the National STEM Assessment of Student Achievement conference.

89. Klymkowsky, M.W. 2007. Teaching without a textbook: a strategy to focus learning.  CBE Life Sci Educ 6: 190-193.

88. Garvin-Doxas, K., M.W. Klymkowsky & S. Elrod. 2007. Building, using, and maximizing the impact of concept inventories in the biology education: a meeting report. CBE Life Science Educ, 6: 277-282.

87. Zhang, C, & M.W. Klymkowsky, 2007. The Sox Axis, Nodal Signaling, & Germ Layer Specification. Differentiation 75: 536-545. (in memory of Larry Etkin).

83. Klymkowsky, M.W. 2007. Cell Adhesion. McGraw-Hill Encyclopedia of Science & Technolog. ( I think this was published, at least they paid me to write it!). 

82. Klymkowsky, M.W., Taylor, L.B.*, S.R. Spindler *, & K. Garvin-Doxas. 2006. Two-dimensional, implicit confidence tests as a tool for recognizing student misconceptions. J. College Science Teaching 36:44-48.

81. Klymkowsky, M.W., R. Gheen, I. Doxas & K. Garvin-Doxas. 2006. Mapping student misconceptions using Ed's Tools, an on-line analysis system. Dev. Biol. 295:349-350. doi:10.1016/j.ydbio.2006.04.074 .

80. Grow, M.W.& M.W. Klymkowsky. 2006. Xenopus as a Model Organism for Functional Genomics: Rich History, Promising Future. in Encyclopedic Reference of Genomics and Proteomics in Molecular Medicine.